Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | 5_1_36/D4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1590637 bp
Thymine Count
1633510 bp
Guanine Count
1190690 bp
Cytosine Count
1119911 bp
Genome Length
5534748 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter, atp-binding protein | BSEG_02173 | O84421 | Positive | 2287825 - 2288592 | 28714.7 |
| hypothetical protein | BSEG_02174 | Not Available | Positive | 2289053 - 2292457 | 129147.0 |
| polysaccharide deacetylase | BSEG_02175 | Q8DP63 | Positive | 2292528 - 2293139 | 24599.9 |
| hypothetical protein | BSEG_02176 | A6LGF6 | Negative | 2293163 - 2294521 | 50967.4 |
| glycosyl hydrolase family 3 n-terminal domain protein | BSEG_02177 | Q56078 | Negative | 2294539 - 2296854 | 84703.8 |
| susd family protein | BSEG_02178 | A7LXT5 | Negative | 2296937 - 2298460 | 57193.0 |
| tonb-linked outer membrane protein, susc/raga family | BSEG_02179 | Not Available | Negative | 2298467 - 2301523 | 112620.0 |
| hypothetical protein | BSEG_02180 | T2KN67 | Negative | 2301682 - 2302854 | 42934.5 |
| gluconate 5-dehydrogenase | BSEG_02181 | T2KLZ8 | Negative | 2302951 - 2303754 | 28590.5 |
| 4-deoxy-l-threo-5-hexosulose-uronate ketol-isomerase | BSEG_02182 | Q8A2S4 | Negative | 2303791 - 2304633 | 31682.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

