Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | 5_1_36/D4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1590637 bp
Thymine Count
1633510 bp
Guanine Count
1190690 bp
Cytosine Count
1119911 bp
Genome Length
5534748 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thump domain protein | BSEG_02164 | Q55156 | Positive | 2275030 - 2276478 | 56234.5 |
| peptidase, s9a/b/c family, catalytic domain protein | BSEG_02165 | Q7MUW6 | Positive | 2276485 - 2278698 | 83580.3 |
| phosphoribosylamine--glycine ligase | BSEG_02166 | P57829 | Positive | 2278714 - 2279982 | 45595.0 |
| hypothetical protein | BSEG_02167 | Not Available | Positive | 2280031 - 2280936 | 34757.4 |
| snare-like domain protein | BSEG_02168 | Not Available | Positive | 2280912 - 2281379 | 17015.3 |
| hypothetical protein | BSEG_02169 | Q3IF34 | Positive | 2281384 - 2282067 | 26029.9 |
| hypothetical protein | BSEG_02170 | Not Available | Negative | 2282478 - 2285681 | 118122.0 |
| transcriptional regulator, arac family | BSEG_02171 | Not Available | Negative | 2285738 - 2286235 | 19125.2 |
| hypothetical protein | BSEG_04451 | Not Available | Positive | 2286731 - 2286904 | 6724.46 |
| abc transporter, substrate-binding protein | BSEG_02172 | Not Available | Positive | 2286910 - 2287815 | 34021.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

