Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | 5_1_36/D4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1590637 bp
Thymine Count
1633510 bp
Guanine Count
1190690 bp
Cytosine Count
1119911 bp
Genome Length
5534748 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad dependent epimerase/dehydratase family protein | BSEG_02156 | Q9S642 | Negative | 2266641 - 2267687 | 40230.5 |
| cation diffusion facilitator family transporter | BSEG_02157 | C0SP78 | Negative | 2267698 - 2268639 | 34492.5 |
| ribonuclease r | BSEG_02158 | O32231 | Positive | 2268731 - 2270878 | 82055.5 |
| hypothetical protein | BSEG_04449 | Not Available | Negative | 2270941 - 2271069 | 4771.91 |
| putative serine o-acetyltransferase | BSEG_02159 | Not Available | Positive | 2271179 - 2272087 | 32826.2 |
| atpase/histidine kinase/dna gyrase b/hsp90 domain protein | BSEG_02160 | Not Available | Negative | 2272141 - 2272611 | 18311.2 |
| putative dna protection during starvation protein 2 | BSEG_02161 | P45173 | Negative | 2272706 - 2273182 | 17906.4 |
| putative oxidative stress regulatory protein oxyr | BSEG_02162 | P44418 | Positive | 2273309 - 2274235 | 35347.4 |
| hypothetical protein | BSEG_02163 | Not Available | Positive | 2274328 - 2274519 | 7275.22 |
| hypothetical protein | BSEG_04450 | Not Available | Negative | 2274599 - 2274721 | 4690.06 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

