Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | 5_1_36/D4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1590637 bp
Thymine Count
1633510 bp
Guanine Count
1190690 bp
Cytosine Count
1119911 bp
Genome Length
5534748 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative dolichyl-phosphate-mannose-protein mannosyltransferase | BSEG_02146 | O67270 | Positive | 2250554 - 2252278 | 65354.1 |
| arylsulfatase | BSEG_02147 | Not Available | Negative | 2252362 - 2254188 | 68121.4 |
| ribonuclease h | BSEG_02148 | Q9KEI9 | Negative | 2254204 - 2254830 | 23900.6 |
| arginine--trna ligase | BSEG_02149 | A6KZA8 | Negative | 2254831 - 2256651 | 68029.7 |
| tonb-linked outer membrane protein, susc/raga family | BSEG_02150 | Not Available | Positive | 2257345 - 2260431 | 114155.0 |
| susd family protein | BSEG_02151 | Not Available | Positive | 2260447 - 2261997 | 58638.8 |
| collagenase | BSEG_02152 | P59916 | Negative | 2262123 - 2263409 | 47924.8 |
| tim-barrel protein, nifr3 family | BSEG_02153 | Q8EJR8 | Positive | 2263560 - 2264549 | 37213.5 |
| hypothetical protein | BSEG_02154 | Not Available | Negative | 2264645 - 2265496 | 29141.2 |
| pap2 family protein | BSEG_02155 | Not Available | Negative | 2265673 - 2266650 | 37776.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

