Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | 5_1_36/D4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1590637 bp
Thymine Count
1633510 bp
Guanine Count
1190690 bp
Cytosine Count
1119911 bp
Genome Length
5534748 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor plug domain protein | BSEG_02125 | Not Available | Positive | 2226877 - 2229531 | 100771.0 |
| hypothetical protein | BSEG_02126 | Not Available | Positive | 2229538 - 2230503 | 36369.2 |
| hypothetical protein | BSEG_04448 | Not Available | Positive | 2230510 - 2230629 | 4407.02 |
| 4-phosphoerythronate dehydrogenase | BSEG_02127 | Q8A2E4 | Negative | 2230668 - 2231693 | 38323.9 |
| heptosyltransferase | BSEG_02128 | Not Available | Positive | 2231798 - 2232829 | 38639.3 |
| lipid a biosynthesis (kdo)2-(lauroyl)-lipid iva acyltransferase | BSEG_02129 | Not Available | Positive | 2232830 - 2233753 | 37622.8 |
| udp-galactopyranose mutase | BSEG_02130 | P37747 | Positive | 2233756 - 2234862 | 42926.7 |
| hypothetical protein | BSEG_02131 | Not Available | Positive | 2234946 - 2235662 | 27528.9 |
| hypothetical protein | BSEG_02132 | Not Available | Positive | 2235678 - 2236430 | 29463.6 |
| glycosyltransferase, group 2 family protein | BSEG_02133 | Not Available | Positive | 2236445 - 2237344 | 34478.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

