Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | 5_1_36/D4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1590637 bp
Thymine Count
1633510 bp
Guanine Count
1190690 bp
Cytosine Count
1119911 bp
Genome Length
5534748 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BSEG_02095 | Not Available | Positive | 2181146 - 2182441 | 49491.6 |
| hypothetical protein | BSEG_02096 | Not Available | Positive | 2182492 - 2183067 | 21474.0 |
| pas domain s-box protein | BSEG_02097 | Q9P896 | Negative | 2183183 - 2185606 | 93050.0 |
| hypothetical protein | BSEG_02098 | Not Available | Positive | 2185806 - 2186627 | 30770.9 |
| hypothetical protein | BSEG_02099 | Not Available | Negative | 2186716 - 2187525 | 31328.0 |
| hypothetical protein | BSEG_02100 | Not Available | Negative | 2187522 - 2189444 | 73408.3 |
| gh3 auxin-responsive promoter | BSEG_02101 | O22190 | Negative | 2189449 - 2190987 | 58741.6 |
| 6-phosphofructokinase isozyme 1 | BSEG_02102 | Q8A2E9 | Positive | 2191102 - 2192112 | 35805.2 |
| response regulator receiver domain protein | BSEG_02103 | Not Available | Negative | 2192122 - 2196195 | 154957.0 |
| putative phage head-tail adaptor | BSEG_02104 | Not Available | Positive | 2196379 - 2199546 | 118204.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

