Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | 5_1_36/D4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1590637 bp
Thymine Count
1633510 bp
Guanine Count
1190690 bp
Cytosine Count
1119911 bp
Genome Length
5534748 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susd family protein | BSEG_01588 | Not Available | Negative | 226363 - 228411 | 77594.9 |
| tonb-linked outer membrane protein, susc/raga family | BSEG_01587 | Not Available | Negative | 228425 - 231688 | 121158.0 |
| glycosyl hydrolase, family 43 | BSEG_01586 | P49943 | Negative | 231862 - 232776 | 34725.8 |
| glycosyl hydrolase, family 43 | BSEG_01585 | Q45071 | Negative | 232800 - 234134 | 50222.4 |
| glycosyl hydrolase family 2, sugar binding domain protein | BSEG_01584 | Not Available | Negative | 234155 - 236686 | 96260.5 |
| atpase/histidine kinase/dna gyrase b/hsp90 domain protein | BSEG_01583 | Not Available | Positive | 236927 - 240934 | 152443.0 |
| hypothetical protein | BSEG_01579 | Not Available | Positive | 242665 - 243492 | 31895.0 |
| hypothetical protein | BSEG_04544 | Not Available | Negative | 244826 - 245368 | 20748.7 |
| hypothetical protein | BSEG_04545 | Not Available | Positive | 245383 - 245526 | 5239.2 |
| hypothetical protein | BSEG_01575 | Not Available | Negative | 247012 - 248616 | 61364.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

