Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | 5_1_36/D4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1590637 bp
Thymine Count
1633510 bp
Guanine Count
1190690 bp
Cytosine Count
1119911 bp
Genome Length
5534748 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux abc transporter, permease protein | BSEG_02003 | Not Available | Negative | 2060004 - 2061242 | 45814.1 |
| ribosome-binding factor a | BSEG_02004 | A0M6N1 | Negative | 2061252 - 2061587 | 12986.9 |
| o-methyltransferase | BSEG_02005 | Q00719 | Negative | 2061656 - 2062294 | 24413.6 |
| pyruvate kinase | BSEG_02006 | O51323 | Negative | 2062310 - 2063773 | 54241.6 |
| 3-dehydroquinate dehydratase, type ii | BSEG_02007 | C4L3G2 | Negative | 2063806 - 2064228 | 15728.1 |
| tyrosine recombinase xerd | BSEG_02008 | Q49XU5 | Positive | 2064295 - 2065221 | 35676.5 |
| tetratricopeptide repeat protein | BSEG_02009 | Not Available | Positive | 2065380 - 2067056 | 60891.9 |
| hypothetical protein | BSEG_02010 | Not Available | Positive | 2067209 - 2068276 | 40605.2 |
| mg chelatase-like protein | BSEG_02011 | P57015 | Positive | 2068281 - 2069819 | 56248.9 |
| hypothetical protein | BSEG_02012 | Not Available | Negative | 2069821 - 2069988 | 6558.68 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

