Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | 5_1_36/D4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1590637 bp
Thymine Count
1633510 bp
Guanine Count
1190690 bp
Cytosine Count
1119911 bp
Genome Length
5534748 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| regulatory protein recx | BSEG_01993 | Not Available | Negative | 2049284 - 2049769 | 18829.6 |
| protein-(glutamine-n5) methyltransferase, release factor-specific | BSEG_01994 | Q8A1D7 | Negative | 2049771 - 2050607 | 31727.3 |
| riboflavin biosynthesis protein ribd | BSEG_01995 | O66534 | Positive | 2050652 - 2051719 | 40176.1 |
| hypothetical protein | BSEG_01996 | Not Available | Positive | 2051832 - 2053229 | 52235.9 |
| di-trans,poly-cis-decaprenylcistransferase | BSEG_01997 | Q8A1E0 | Positive | 2053263 - 2053994 | 28104.5 |
| outer membrane protein assembly complex, yaet protein | BSEG_01998 | Not Available | Positive | 2054006 - 2056645 | 100661.0 |
| outer membrane protein | BSEG_01999 | Not Available | Positive | 2056666 - 2057181 | 18967.6 |
| outer membrane protein | BSEG_02000 | Not Available | Positive | 2057239 - 2057742 | 19288.3 |
| glutamate racemase | BSEG_02001 | Q1GHL1 | Positive | 2057818 - 2058690 | 32355.2 |
| pyridoxal kinase | BSEG_02002 | Q57LS3 | Positive | 2058747 - 2059619 | 32875.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

