Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | 5_1_36/D4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1590637 bp
Thymine Count
1633510 bp
Guanine Count
1190690 bp
Cytosine Count
1119911 bp
Genome Length
5534748 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susd family protein | BSEG_01975 | Not Available | Negative | 2012174 - 2013790 | 60190.0 |
| tonb-linked outer membrane protein, susc/raga family | BSEG_01976 | Not Available | Negative | 2013836 - 2016889 | 113331.0 |
| response regulator receiver domain protein | BSEG_01977 | Not Available | Positive | 2017141 - 2021136 | 152172.0 |
| dna-3-methyladenine glycosylase 1 | BSEG_01978 | P05100 | Positive | 2021196 - 2021825 | 24257.1 |
| susd family protein | BSEG_01979 | Not Available | Negative | 2022600 - 2024273 | 63455.3 |
| tonb-linked outer membrane protein, susc/raga family | BSEG_01980 | Not Available | Negative | 2024288 - 2027275 | 110418.0 |
| glycosyl hydrolase family 3 c-terminal domain protein | BSEG_01981 | T2KMH0 | Negative | 2027586 - 2029943 | 86991.1 |
| hypothetical protein | BSEG_01982 | Not Available | Negative | 2029978 - 2032452 | 92039.6 |
| pectin acetylesterase family protein | BSEG_01983 | Not Available | Negative | 2032485 - 2033414 | 33719.0 |
| polygalacturonase (pectinase) | BSEG_01984 | Not Available | Negative | 2033419 - 2034810 | 52711.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

