Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | 5_1_36/D4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1590637 bp
Thymine Count
1633510 bp
Guanine Count
1190690 bp
Cytosine Count
1119911 bp
Genome Length
5534748 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar-binding domain protein | BSEG_01953 | B5XWL8 | Negative | 1971812 - 1972834 | 38256.6 |
| alkyl hydroperoxide reductase, f subunit | BSEG_01954 | P0A155 | Negative | 1972974 - 1974524 | 56039.5 |
| peroxiredoxin | BSEG_01955 | P0A252 | Negative | 1974537 - 1975103 | 21053.1 |
| phosphopyruvate hydratase | BSEG_01956 | Q89Z05 | Positive | 1975344 - 1976624 | 46019.8 |
| cora-like protein | BSEG_01957 | Not Available | Positive | 1976913 - 1977836 | 35626.5 |
| hypothetical protein | BSEG_01960 | Not Available | Negative | 1979153 - 1980553 | 51059.7 |
| tonb-dependent receptor plug domain protein | BSEG_01961 | Q8DD41 | Negative | 1980608 - 1982995 | 89760.5 |
| glycosyl hydrolase family 2, sugar binding domain protein | BSEG_01962 | Q56307 | Negative | 1983162 - 1986002 | 108457.0 |
| hypothetical protein | BSEG_01963 | Not Available | Negative | 1986018 - 1988600 | 98578.5 |
| susd family protein | BSEG_01964 | Not Available | Negative | 1988698 - 1990395 | 64042.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

