Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | 5_1_36/D4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1590637 bp
Thymine Count
1633510 bp
Guanine Count
1190690 bp
Cytosine Count
1119911 bp
Genome Length
5534748 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycerophosphodiester phosphodiesterase family protein | BSEG_01943 | P37965 | Positive | 1951276 - 1952088 | 30953.9 |
| putative alpha-1,2-mannosidase | BSEG_01944 | Not Available | Positive | 1952108 - 1954441 | 88736.1 |
| polygalacturonase (pectinase) | BSEG_01945 | Not Available | Positive | 1954467 - 1955879 | 52012.0 |
| putative alpha-1,2-mannosidase | BSEG_01946 | D4ATR3 | Positive | 1955882 - 1958161 | 86159.9 |
| histidine acid phosphatase | BSEG_01947 | Not Available | Positive | 1958168 - 1959907 | 66792.8 |
| atpase/histidine kinase/dna gyrase b/hsp90 domain protein | BSEG_01948 | Not Available | Negative | 1960156 - 1964190 | 152532.0 |
| tonb-linked outer membrane protein, susc/raga family | BSEG_01949 | Not Available | Positive | 1964386 - 1967517 | 117450.0 |
| susd family protein | BSEG_01950 | Not Available | Positive | 1967530 - 1969380 | 71110.1 |
| hypothetical protein | BSEG_01951 | Not Available | Positive | 1969393 - 1970067 | 24987.8 |
| hypothetical protein | BSEG_01952 | Not Available | Positive | 1970142 - 1971731 | 60547.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

