Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | 5_1_36/D4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1590637 bp
Thymine Count
1633510 bp
Guanine Count
1190690 bp
Cytosine Count
1119911 bp
Genome Length
5534748 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | BSEG_01935 | Not Available | Positive | 1933272 - 1935569 | 87633.9 |
| peptidase, s41 family | BSEG_01936 | Q44879 | Negative | 1935635 - 1937299 | 61874.0 |
| kinase, pfkb family | BSEG_01937 | Q55480 | Negative | 1937373 - 1938359 | 35367.0 |
| Trna-asn | Not Available | Not Available | Positive | 1938440 - 1938513 | Not Available |
| Trna-asn | Not Available | Not Available | Positive | 1938538 - 1938611 | Not Available |
| atpase/histidine kinase/dna gyrase b/hsp90 domain protein | BSEG_01938 | Not Available | Positive | 1938749 - 1942969 | 162777.0 |
| alpha-n-acetylglucosaminidase (naglu) | BSEG_01939 | Q9FNA3 | Positive | 1943052 - 1945316 | 87246.1 |
| hypothetical protein | BSEG_01940 | Not Available | Positive | 1945324 - 1946442 | 41635.9 |
| tonb-linked outer membrane protein, susc/raga family | BSEG_01941 | Not Available | Positive | 1946518 - 1949541 | 111882.0 |
| susd family protein | BSEG_01942 | Not Available | Positive | 1949562 - 1951202 | 61753.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

