Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | 5_1_36/D4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1590637 bp
Thymine Count
1633510 bp
Guanine Count
1190690 bp
Cytosine Count
1119911 bp
Genome Length
5534748 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| muts domain v protein | BSEG_01880 | Q97I19 | Positive | 1890075 - 1891979 | 72382.4 |
| hypothetical protein | BSEG_01881 | Not Available | Negative | 1892074 - 1892613 | 19788.7 |
| hypothetical protein | BSEG_01882 | Not Available | Negative | 1892731 - 1893156 | 15829.0 |
| ribosomal protein l17 | BSEG_01883 | A6KYG9 | Negative | 1893570 - 1894058 | 17955.6 |
| dna-directed rna polymerase, alpha subunit | BSEG_01884 | A6KYH0 | Negative | 1894062 - 1895054 | 37535.1 |
| ribosomal protein s4 | BSEG_01885 | A6KYH1 | Negative | 1895066 - 1895671 | 22540.2 |
| 30s ribosomal protein s11 | BSEG_01886 | A6KYH2 | Negative | 1895788 - 1896177 | 13878.8 |
| 30s ribosomal protein s13 | BSEG_01887 | A6KYH3 | Negative | 1896189 - 1896569 | 14149.3 |
| ribosomal protein l36 | BSEG_01888 | Q5L8D2 | Negative | 1896603 - 1896719 | 4586.82 |
| translation initiation factor if-1 | BSEG_01889 | Q5L8D1 | Negative | 1896734 - 1896952 | 8235.14 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

