Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | 5_1_36/D4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1590637 bp
Thymine Count
1633510 bp
Guanine Count
1190690 bp
Cytosine Count
1119911 bp
Genome Length
5534748 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyl hydrolase, family 43 | BSEG_01849 | Q9WXE8 | Negative | 1835790 - 1837331 | 58481.5 |
| alpha-galactosidase | BSEG_01850 | Q92457 | Negative | 1837427 - 1839583 | 82607.3 |
| transcriptional regulator, arac family | BSEG_01851 | P28809 | Positive | 1839771 - 1840667 | 34684.5 |
| glycosyl hydrolase family 2, sugar binding domain protein | BSEG_01852 | Not Available | Negative | 1840680 - 1842650 | 73512.8 |
| f5/8 type c domain protein | BSEG_01853 | Q5H7P5 | Negative | 1842743 - 1845685 | 111339.0 |
| aldose 1-epimerase | BSEG_01854 | P05149 | Negative | 1845715 - 1846737 | 38766.6 |
| susd family protein | BSEG_01855 | Not Available | Negative | 1846827 - 1848446 | 62013.7 |
| tonb-linked outer membrane protein, susc/raga family | BSEG_01856 | Not Available | Negative | 1848492 - 1851545 | 113248.0 |
| hypothetical protein | BSEG_01857 | Not Available | Negative | 1851585 - 1853612 | 76328.4 |
| response regulator receiver domain protein | BSEG_01858 | Not Available | Negative | 1853820 - 1857851 | 154608.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

