Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | 5_1_36/D4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1590637 bp
Thymine Count
1633510 bp
Guanine Count
1190690 bp
Cytosine Count
1119911 bp
Genome Length
5534748 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BSEG_04447 | Not Available | Negative | 1823855 - 1823983 | 5060.16 |
| resolvase, n-terminal domain protein | BSEG_01840 | Not Available | Negative | 1824199 - 1824819 | 23669.1 |
| hypothetical protein | BSEG_01841 | Not Available | Positive | 1825257 - 1825730 | 17164.3 |
| hypothetical protein | BSEG_01842 | Not Available | Negative | 1825833 - 1826831 | 38577.1 |
| hypothetical protein | BSEG_01843 | Not Available | Negative | 1826939 - 1827136 | 7310.58 |
| peptidase, s9a/b/c family, catalytic domain protein | BSEG_01844 | Not Available | Negative | 1827859 - 1828896 | 39534.7 |
| susd family protein | BSEG_01845 | Not Available | Negative | 1828930 - 1830372 | 53689.5 |
| tonb-linked outer membrane protein, susc/raga family | BSEG_01846 | Not Available | Negative | 1830402 - 1833698 | 122071.0 |
| sigma factor regulatory protein, fecr/pupr family | BSEG_01847 | Not Available | Negative | 1833854 - 1834852 | 38159.5 |
| rna polymerase sigma-70 factor | BSEG_01848 | Not Available | Negative | 1834913 - 1835497 | 23201.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

