Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | 5_1_36/D4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1590637 bp
Thymine Count
1633510 bp
Guanine Count
1190690 bp
Cytosine Count
1119911 bp
Genome Length
5534748 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyl hydrolase, family 43 | BSEG_01607 | Not Available | Positive | 202224 - 203873 | 61617.0 |
| glycosyl hydrolase, family 88 | BSEG_01606 | Not Available | Positive | 203890 - 205113 | 46621.3 |
| transcriptional regulator, blai/meci/copy family | BSEG_01605 | Not Available | Positive | 205325 - 205687 | 14012.8 |
| tonb-dependent receptor | BSEG_01604 | Q8A1G1 | Positive | 205721 - 207607 | 70687.0 |
| tetratricopeptide repeat protein | BSEG_01603 | Not Available | Positive | 207618 - 208961 | 51705.5 |
| antioxidant, ahpc/tsa family | BSEG_01602 | Not Available | Positive | 208992 - 210182 | 45049.2 |
| hypothetical protein | BSEG_01601 | Not Available | Positive | 210203 - 211705 | 57056.5 |
| istb-like atp-binding protein | BSEG_04538 | Not Available | Negative | 211729 - 212502 | 29607.1 |
| integrase core domain protein | BSEG_04539 | Not Available | Negative | 212513 - 214033 | 59588.1 |
| hypothetical protein | BSEG_04540 | Not Available | Positive | 214491 - 214589 | 3733.64 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

