Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | 5_1_36/D4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1590637 bp
Thymine Count
1633510 bp
Guanine Count
1190690 bp
Cytosine Count
1119911 bp
Genome Length
5534748 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-linked outer membrane protein, susc/raga family | BSEG_01802 | Not Available | Negative | 1765951 - 1769022 | 114382.0 |
| response regulator receiver domain protein | BSEG_01803 | Not Available | Negative | 1769163 - 1773323 | 158264.0 |
| transcriptional regulator, arac family | BSEG_01804 | Not Available | Positive | 1773470 - 1774390 | 35152.7 |
| transglycosylase slt domain protein | BSEG_01805 | P0AEZ8 | Positive | 1774398 - 1775396 | 37345.8 |
| transporter, cation channel family protein | BSEG_01806 | Q02006 | Negative | 1775422 - 1776279 | 32718.8 |
| beta galactosidase small chain | BSEG_01807 | Not Available | Positive | 1776395 - 1779490 | 117571.0 |
| outer membrane insertion signal domain protein | BSEG_01808 | Not Available | Positive | 1779891 - 1782458 | 97308.7 |
| rna polymerase sigma-70 factor | BSEG_01809 | Not Available | Positive | 1782513 - 1783040 | 20717.8 |
| sigma factor regulatory protein, fecr/pupr family | BSEG_01810 | Not Available | Positive | 1783037 - 1784047 | 38831.4 |
| oxidoreductase, nad-binding domain protein | BSEG_01811 | A6KY05 | Negative | 1784169 - 1785410 | 47345.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

