Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | 5_1_36/D4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1590637 bp
Thymine Count
1633510 bp
Guanine Count
1190690 bp
Cytosine Count
1119911 bp
Genome Length
5534748 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative argininosuccinate synthase | BSEG_01792 | Q60174 | Negative | 1754218 - 1755426 | 45098.6 |
| hypothetical protein | BSEG_01793 | Not Available | Negative | 1755534 - 1756091 | 20628.9 |
| arginine repressor | BSEG_01794 | A6KXY8 | Negative | 1756115 - 1756591 | 17501.2 |
| rhamnulokinase | BSEG_01795 | Q8A1A3 | Positive | 1756899 - 1758377 | 54799.7 |
| l-rhamnose isomerase | BSEG_01796 | Q8A1A2 | Positive | 1758420 - 1759673 | 47405.2 |
| l-rhamnose-proton symport protein (rhat) | BSEG_01797 | A7FN78 | Positive | 1759767 - 1760786 | 35982.0 |
| class ii aldolase and adducin domain protein | BSEG_01798 | Q8A1A0 | Positive | 1760848 - 1761681 | 31201.8 |
| hypothetical protein | BSEG_01799 | Not Available | Positive | 1762040 - 1762537 | 18505.0 |
| hypothetical protein | BSEG_01800 | Not Available | Negative | 1762638 - 1764152 | 55827.0 |
| susd family protein | BSEG_01801 | Not Available | Negative | 1764320 - 1765939 | 60033.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

