Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | 5_1_36/D4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1590637 bp
Thymine Count
1633510 bp
Guanine Count
1190690 bp
Cytosine Count
1119911 bp
Genome Length
5534748 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rtec protein | BSEG_01783 | Not Available | Positive | 1744632 - 1745225 | 23491.1 |
| hypothetical protein | BSEG_01784 | Not Available | Positive | 1745675 - 1746166 | 18963.9 |
| hypothetical protein | BSEG_04443 | Not Available | Positive | 1746142 - 1746249 | 4136.76 |
| hypothetical protein | BSEG_01785 | Not Available | Negative | 1746427 - 1746843 | 15826.4 |
| 4fe-4s binding domain protein | BSEG_01786 | Not Available | Negative | 1746856 - 1748382 | 55778.6 |
| tat pathway signal sequence domain protein | BSEG_01787 | Not Available | Negative | 1748418 - 1749800 | 52602.8 |
| metalloenzyme superfamily | BSEG_01788 | Not Available | Negative | 1749980 - 1750876 | 33233.2 |
| pyrroline-5-carboxylate reductase | BSEG_01789 | Q54IL7 | Negative | 1751148 - 1751921 | 27215.3 |
| putative acetylornithine transaminase | BSEG_01790 | P36839 | Negative | 1752106 - 1753230 | 40952.7 |
| n-acetyl-gamma-glutamyl-phosphate reductase | BSEG_01791 | A6KXY5 | Negative | 1753244 - 1754212 | 36000.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

