Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | 5_1_36/D4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1590637 bp
Thymine Count
1633510 bp
Guanine Count
1190690 bp
Cytosine Count
1119911 bp
Genome Length
5534748 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BSEG_01771 | Not Available | Negative | 1731818 - 1732201 | 15042.1 |
| hypothetical protein | BSEG_01772 | Not Available | Negative | 1732495 - 1733028 | 19288.1 |
| integrase | BSEG_01773 | Not Available | Negative | 1733296 - 1734357 | 41389.0 |
| site-specific recombinase, phage integrase family | BSEG_01774 | Q7ZAM3 | Negative | 1734371 - 1735600 | 47276.4 |
| hypothetical protein | BSEG_01776 | Not Available | Positive | 1736116 - 1736484 | 13772.6 |
| dna binding domain, excisionase family | BSEG_01778 | Not Available | Negative | 1740114 - 1740413 | 11561.0 |
| hypothetical protein | BSEG_01779 | Not Available | Negative | 1740450 - 1740743 | 11142.7 |
| hypothetical protein | BSEG_01780 | Not Available | Positive | 1741286 - 1742353 | 39486.7 |
| lyttr dna-binding domain protein | BSEG_01781 | Q8D4U6 | Positive | 1742614 - 1743372 | 29574.7 |
| histidine kinase | BSEG_01782 | Not Available | Positive | 1743386 - 1744381 | 37869.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

