Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | 5_1_36/D4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1590637 bp
Thymine Count
1633510 bp
Guanine Count
1190690 bp
Cytosine Count
1119911 bp
Genome Length
5534748 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| relaxase/mobilization nuclease domain protein | BSEG_01739 | Not Available | Negative | 1708740 - 1709987 | 46930.8 |
| hypothetical protein | BSEG_01740 | Not Available | Negative | 1709966 - 1710412 | 17445.1 |
| hypothetical protein | BSEG_01742 | Not Available | Negative | 1711397 - 1712053 | 23972.3 |
| conjugative transposon protein traa family protein | BSEG_01743 | Not Available | Positive | 1712052 - 1712813 | 28528.6 |
| hypothetical protein | BSEG_01744 | Not Available | Positive | 1712818 - 1713228 | 15645.7 |
| hypothetical protein | BSEG_01745 | Not Available | Positive | 1713258 - 1713611 | 13166.8 |
| hypothetical protein | BSEG_01746 | Not Available | Positive | 1713614 - 1714327 | 26693.3 |
| conjugative transposon protein trae | BSEG_01747 | Not Available | Positive | 1714503 - 1714814 | 10811.5 |
| conjugative transposon protein traf | BSEG_01748 | Not Available | Positive | 1714856 - 1715191 | 12504.8 |
| conjugation system atpase, trag family | BSEG_01749 | Not Available | Positive | 1715188 - 1717692 | 96080.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

