Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | 5_1_36/D4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1590637 bp
Thymine Count
1633510 bp
Guanine Count
1190690 bp
Cytosine Count
1119911 bp
Genome Length
5534748 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor, sigma-70 family | BSEG_01715 | Not Available | Negative | 1688403 - 1688855 | 17337.6 |
| hypothetical protein | BSEG_01717 | Not Available | Positive | 1689375 - 1689920 | 20409.3 |
| methyltransferase domain protein | BSEG_04440 | P44074 | Positive | 1689954 - 1690832 | 33652.8 |
| rrna adenine n-6-methyltransferase | BSEG_01720 | P0A4D6 | Positive | 1690868 - 1691629 | 29654.1 |
| hypothetical protein | BSEG_04441 | Not Available | Positive | 1691574 - 1691765 | 7087.91 |
| omega transcriptional repressor | BSEG_01722 | Not Available | Positive | 1692275 - 1692418 | 5437.69 |
| epsilon-antitoxin | BSEG_01723 | Q57231 | Positive | 1692435 - 1692707 | 10721.8 |
| zeta toxin | BSEG_01724 | Q54944 | Positive | 1692709 - 1693183 | 17562.8 |
| hypothetical protein | BSEG_04442 | Not Available | Positive | 1693184 - 1693531 | 13224.1 |
| hypothetical protein | BSEG_01725 | Not Available | Positive | 1693603 - 1693767 | 6052.44 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

