Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | 5_1_36/D4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1590637 bp
Thymine Count
1633510 bp
Guanine Count
1190690 bp
Cytosine Count
1119911 bp
Genome Length
5534748 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitroreductase family protein | BSEG_01685 | Not Available | Negative | 1659283 - 1659912 | 23899.8 |
| transcriptional regulator, arac family | BSEG_01686 | Not Available | Positive | 1660047 - 1660907 | 33349.2 |
| hypothetical protein | BSEG_01687 | Not Available | Negative | 1661092 - 1661535 | 17482.1 |
| hypothetical protein | BSEG_01688 | Not Available | Positive | 1661958 - 1662209 | 9454.4 |
| hypothetical protein | BSEG_01689 | Not Available | Positive | 1662237 - 1662548 | 12392.0 |
| dna binding domain, excisionase family | BSEG_01690 | Not Available | Positive | 1662586 - 1662891 | 11958.3 |
| hypothetical protein | BSEG_04438 | Not Available | Negative | 1663022 - 1663234 | 7742.33 |
| hypothetical protein | BSEG_01691 | Not Available | Negative | 1663234 - 1663608 | 13997.1 |
| site-specific recombinase, phage integrase family | BSEG_01693 | Not Available | Positive | 1664123 - 1665352 | 47770.2 |
| site-specific recombinase, phage integrase family | BSEG_01694 | Not Available | Positive | 1665417 - 1666628 | 46288.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

