Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | 5_1_36/D4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1590637 bp
Thymine Count
1633510 bp
Guanine Count
1190690 bp
Cytosine Count
1119911 bp
Genome Length
5534748 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cupin domain protein | BSEG_01675 | Not Available | Negative | 1648374 - 1648928 | 20504.8 |
| integrase family protein | BSEG_01676 | Not Available | Positive | 1649323 - 1650420 | 42779.0 |
| hypothetical protein | BSEG_01677 | Not Available | Negative | 1650606 - 1651610 | 38835.5 |
| putative fused dna-binding response regulator in two-component regulatory system with zras: response regulator/sigma54 interaction protein | BSEG_01678 | Not Available | Negative | 1651727 - 1653049 | 49937.3 |
| atpase/histidine kinase/dna gyrase b/hsp90 domain protein | BSEG_01679 | P30855 | Negative | 1653042 - 1655351 | 87266.3 |
| base excision dna repair protein, hhh-gpd family | BSEG_01680 | Not Available | Negative | 1655409 - 1656050 | 24994.2 |
| dna-formamidopyrimidine glycosylase | BSEG_01681 | A5D0T6 | Negative | 1656057 - 1656887 | 31841.6 |
| radical sam domain protein | BSEG_01682 | Q58096 | Negative | 1656880 - 1657773 | 34455.2 |
| nitroreductase family protein | BSEG_01683 | Not Available | Negative | 1657767 - 1658366 | 22944.0 |
| putative membrane protein | BSEG_01684 | Not Available | Negative | 1658373 - 1659278 | 32750.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

