Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | 5_1_36/D4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1590637 bp
Thymine Count
1633510 bp
Guanine Count
1190690 bp
Cytosine Count
1119911 bp
Genome Length
5534748 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rhodanese-like protein | BSEG_03719 | Not Available | Positive | 1595060 - 1595458 | 15093.2 |
| n-acetylornithine carbamoyltransferase | BSEG_03718 | Q8A1E9 | Negative | 1595841 - 1596806 | 36428.7 |
| glutamate-5-semialdehyde dehydrogenase | BSEG_03717 | A6KXU8 | Negative | 1596826 - 1598079 | 45555.8 |
| glutamate 5-kinase | BSEG_03716 | Q8A1E7 | Negative | 1598117 - 1599199 | 39449.9 |
| cof-like hydrolase | BSEG_03715 | Q45494 | Positive | 1599358 - 1600140 | 28783.6 |
| putative alpha-1,2-mannosidase | BSEG_03714 | Not Available | Positive | 1600348 - 1602540 | 82315.1 |
| hypothetical protein | BSEG_03713 | Not Available | Positive | 1602859 - 1603989 | 43799.0 |
| hypothetical protein | BSEG_03712 | Not Available | Positive | 1604011 - 1604652 | 24646.1 |
| susd family protein | BSEG_03711 | Not Available | Negative | 1604753 - 1606342 | 60057.3 |
| tonb-linked outer membrane protein, susc/raga family | BSEG_03710 | Not Available | Negative | 1606358 - 1609678 | 122804.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

