Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | 5_1_36/D4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1590637 bp
Thymine Count
1633510 bp
Guanine Count
1190690 bp
Cytosine Count
1119911 bp
Genome Length
5534748 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-linked outer membrane protein, susc/raga family | BSEG_03730 | Not Available | Negative | 1580525 - 1583581 | 112900.0 |
| sigma-70 region 2 | BSEG_03729 | Not Available | Negative | 1583808 - 1584329 | 20678.0 |
| hypothetical protein | BSEG_04434 | Not Available | Positive | 1584444 - 1584536 | 3344.14 |
| hypothetical protein | BSEG_03728 | Not Available | Negative | 1584500 - 1586407 | 72825.0 |
| hypothetical protein | BSEG_03725 | Not Available | Negative | 1588860 - 1590206 | 50203.2 |
| pasta domain protein | BSEG_03724 | Not Available | Positive | 1590356 - 1590997 | 23480.0 |
| pseudouridine synthase, rlua family | BSEG_03723 | O50310 | Positive | 1591016 - 1592089 | 40902.8 |
| d-ala d-ala ligase n-terminal domain protein | BSEG_03722 | A6KXU3 | Positive | 1592086 - 1593060 | 36103.2 |
| hypothetical protein | BSEG_03721 | Not Available | Positive | 1593164 - 1594321 | 44600.7 |
| hypothetical protein | BSEG_03720 | Not Available | Positive | 1594380 - 1595030 | 24839.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

