Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | 5_1_36/D4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1590637 bp
Thymine Count
1633510 bp
Guanine Count
1190690 bp
Cytosine Count
1119911 bp
Genome Length
5534748 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susd family protein | BSEG_03780 | Not Available | Negative | 1492970 - 1494712 | 67448.8 |
| tonb-linked outer membrane protein, susc/raga family | BSEG_03779 | Not Available | Negative | 1494725 - 1498003 | 122455.0 |
| sigma factor regulatory protein, fecr/pupr family | BSEG_03778 | Not Available | Negative | 1498154 - 1499098 | 36136.7 |
| rna polymerase sigma-70 factor | BSEG_03777 | Not Available | Negative | 1499172 - 1499732 | 22126.4 |
| hrdc domain protein | BSEG_03776 | Q196V4 | Positive | 1499936 - 1502449 | 97122.1 |
| tonb-linked outer membrane protein, susc/raga family | BSEG_03775 | Not Available | Positive | 1502964 - 1506035 | 113238.0 |
| susd family protein | BSEG_03774 | Not Available | Positive | 1506048 - 1507601 | 58367.6 |
| glycosyl hydrolase, family 43 | BSEG_03773 | Not Available | Negative | 1507721 - 1508722 | 37760.4 |
| hypothetical protein | BSEG_03772 | Not Available | Negative | 1509048 - 1510190 | 42595.3 |
| glycosyl hydrolase, family 43 | BSEG_03771 | P77713 | Negative | 1510216 - 1512672 | 94041.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

