Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | 5_1_36/D4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1590637 bp
Thymine Count
1633510 bp
Guanine Count
1190690 bp
Cytosine Count
1119911 bp
Genome Length
5534748 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BSEG_03790 | Not Available | Positive | 1472490 - 1472843 | 13591.7 |
| hypothetical protein | BSEG_03789 | Not Available | Positive | 1472984 - 1473808 | 30416.1 |
| hypothetical protein | BSEG_03788 | Not Available | Negative | 1473994 - 1476345 | 88917.3 |
| susd family protein | BSEG_03787 | Not Available | Negative | 1476518 - 1478152 | 62487.4 |
| tonb-linked outer membrane protein, susc/raga family | BSEG_03786 | Not Available | Negative | 1478174 - 1481122 | 108894.0 |
| transcriptional regulator, arac family | BSEG_03785 | Not Available | Negative | 1481334 - 1484153 | 107164.0 |
| putative beta-galactosidase | BSEG_03784 | P48982 | Negative | 1484328 - 1486676 | 88354.7 |
| carbohydrate binding domain protein | BSEG_03783 | Not Available | Negative | 1486693 - 1489191 | 92445.5 |
| glycosyl hydrolase, family 43 | BSEG_03782 | Not Available | Negative | 1489219 - 1491162 | 73385.9 |
| o-glycosyl hydrolase family 30 | BSEG_03781 | O16580 | Negative | 1491356 - 1492864 | 58008.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

