Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | 5_1_36/D4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1590637 bp
Thymine Count
1633510 bp
Guanine Count
1190690 bp
Cytosine Count
1119911 bp
Genome Length
5534748 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transporter, mota/tolq/exbb proton channel family protein | BSEG_03801 | Q55834 | Negative | 1461204 - 1461920 | 25772.9 |
| pyridoxine 5'-phosphate synthase | BSEG_03800 | A6KXM3 | Negative | 1461917 - 1462633 | 26387.6 |
| nad(+)/nadh kinase | BSEG_03799 | Q5L911 | Positive | 1462737 - 1463624 | 32782.2 |
| hypothetical protein | BSEG_03798 | Not Available | Positive | 1463796 - 1465106 | 49761.5 |
| hypothetical protein | BSEG_03796 | Not Available | Negative | 1466230 - 1466682 | 17177.1 |
| hypothetical protein | BSEG_03795 | Not Available | Negative | 1466840 - 1467088 | 9919.87 |
| hypothetical protein | BSEG_03794 | Not Available | Negative | 1467146 - 1467370 | 8290.01 |
| hypothetical protein | BSEG_03793 | Not Available | Negative | 1467775 - 1467975 | 7779.78 |
| exonuclease sbccd, c subunit | BSEG_03792 | P13458 | Negative | 1468038 - 1471121 | 116517.0 |
| exonuclease sbccd, d subunit | BSEG_03791 | O68033 | Negative | 1471118 - 1472395 | 47582.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

