Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | 5_1_36/D4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1590637 bp
Thymine Count
1633510 bp
Guanine Count
1190690 bp
Cytosine Count
1119911 bp
Genome Length
5534748 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| triose-phosphate isomerase | BSEG_03811 | A6KXL2 | Negative | 1452239 - 1452994 | 26903.2 |
| hypothetical protein | BSEG_03810 | Not Available | Negative | 1453025 - 1454269 | 47712.6 |
| hypothetical protein | BSEG_03809 | Not Available | Negative | 1454316 - 1454858 | 20792.1 |
| peptidase, m23 family | BSEG_03808 | P44693 | Negative | 1454972 - 1455859 | 33192.0 |
| nucleoside diphosphate kinase | BSEG_03807 | A6LCB6 | Negative | 1455880 - 1456344 | 17375.1 |
| atp-dependent dna helicase recg | BSEG_03806 | Q55681 | Negative | 1456566 - 1458662 | 79842.0 |
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | BSEG_03805 | A6KXL8 | Negative | 1458664 - 1459323 | 24356.5 |
| dj-1 family protein | BSEG_03804 | Not Available | Negative | 1459320 - 1459871 | 19240.6 |
| tonb family domain protein | BSEG_03803 | Not Available | Negative | 1459875 - 1460768 | 31712.9 |
| transport energizing protein, exbd/tolr family | BSEG_03802 | Not Available | Negative | 1460778 - 1461197 | 16051.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

