Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | 5_1_36/D4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1590637 bp
Thymine Count
1633510 bp
Guanine Count
1190690 bp
Cytosine Count
1119911 bp
Genome Length
5534748 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma factor regulatory protein, fecr/pupr family | BSEG_03549 | Not Available | Positive | 1442027 - 1442881 | 32318.8 |
| hypothetical protein | BSEG_03548 | Not Available | Positive | 1442891 - 1444447 | 59995.5 |
| hypothetical protein | BSEG_04432 | Not Available | Positive | 1446362 - 1446481 | 4340.31 |
| hypothetical protein | BSEG_03818 | Not Available | Positive | 1446496 - 1446744 | 9974.22 |
| hypothetical protein | BSEG_03817 | Not Available | Positive | 1446775 - 1447362 | 22338.2 |
| hypothetical protein | BSEG_03816 | Not Available | Positive | 1447373 - 1447663 | 10805.2 |
| lactate/malate dehydrogenase, nad binding domain protein | BSEG_03815 | B9DK67 | Positive | 1447907 - 1448908 | 36008.4 |
| dna primase | BSEG_03814 | Q5HNY6 | Positive | 1448986 - 1451061 | 78739.4 |
| gtp cyclohydrolase i | BSEG_03813 | Q5L925 | Negative | 1451077 - 1451670 | 22694.7 |
| sporulation and cell division repeat protein | BSEG_03812 | Not Available | Negative | 1451675 - 1452133 | 17059.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

