Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | 5_1_36/D4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1590637 bp
Thymine Count
1633510 bp
Guanine Count
1190690 bp
Cytosine Count
1119911 bp
Genome Length
5534748 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| radical sam protein, tigr01212 family | BSEG_03559 | O35008 | Positive | 1432541 - 1433467 | 35431.8 |
| metallo-beta-lactamase domain protein | BSEG_03558 | Q58142 | Positive | 1433483 - 1434670 | 44722.9 |
| putative small-conductance mechanosensitive channel | BSEG_03557 | O52401 | Negative | 1434766 - 1435599 | 30693.8 |
| sua5/ycio/yrdc/ywlc family protein | BSEG_03556 | P0AFR5 | Negative | 1435648 - 1436262 | 23133.3 |
| tetratricopeptide repeat protein | BSEG_03555 | Q0P9V4 | Negative | 1436269 - 1438269 | 76942.2 |
| hypothetical protein | BSEG_03554 | Not Available | Positive | 1438607 - 1438807 | 7941.86 |
| spfh/band 7/phb domain protein | BSEG_03553 | Not Available | Positive | 1438836 - 1439786 | 35363.2 |
| hypothetical protein | BSEG_03552 | Not Available | Positive | 1439795 - 1439989 | 7501.23 |
| hypothetical protein | BSEG_03551 | Not Available | Positive | 1440150 - 1441427 | 49507.3 |
| rna polymerase sigma-70 factor | BSEG_03550 | Not Available | Positive | 1441479 - 1442030 | 22047.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

