Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | 5_1_36/D4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1590637 bp
Thymine Count
1633510 bp
Guanine Count
1190690 bp
Cytosine Count
1119911 bp
Genome Length
5534748 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BSEG_01637 | Not Available | Positive | 146904 - 149708 | 106483.0 |
| glycosyl hydrolase, family 88 | BSEG_01636 | Not Available | Positive | 149942 - 151168 | 46630.6 |
| rna polymerase sigma-70 factor | BSEG_01635 | Not Available | Positive | 151193 - 151738 | 21061.2 |
| hypothetical protein | BSEG_01634 | D7CFN7 | Positive | 151751 - 153634 | 72317.9 |
| hypothetical protein | BSEG_01633 | Not Available | Positive | 153647 - 155236 | 60205.7 |
| tonb-linked outer membrane protein, susc/raga family | BSEG_01632 | Not Available | Positive | 155344 - 158424 | 114606.0 |
| susd family protein | BSEG_01631 | Not Available | Positive | 158453 - 160306 | 68967.7 |
| hypothetical protein | BSEG_01630 | Not Available | Positive | 160479 - 161981 | 55722.8 |
| hypothetical protein | BSEG_01629 | Q8A6L0 | Positive | 161986 - 163920 | 73531.8 |
| putative alpha-1,2-mannosidase | BSEG_01628 | Not Available | Positive | 163917 - 166313 | 91138.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

