Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | 5_1_36/D4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1590637 bp
Thymine Count
1633510 bp
Guanine Count
1190690 bp
Cytosine Count
1119911 bp
Genome Length
5534748 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative phosphoglycolate phosphatase, bacterial | BSEG_03579 | Q65Q22 | Negative | 1406221 - 1406874 | 24337.2 |
| nitroreductase family protein | BSEG_03578 | Q8GED9 | Positive | 1406937 - 1407437 | 18979.8 |
| sodium pump decarboxylase, gamma subunit | BSEG_03577 | Not Available | Positive | 1407706 - 1407957 | 8695.18 |
| biotin-requiring enzyme | BSEG_03576 | Not Available | Positive | 1407988 - 1409850 | 69000.7 |
| sodium ion-translocating decarboxylase, beta subunit | BSEG_03575 | Not Available | Positive | 1409850 - 1411085 | 44269.9 |
| redoxin family protein | BSEG_03574 | Not Available | Negative | 1411285 - 1412634 | 50468.3 |
| thioredoxin | BSEG_03573 | Not Available | Negative | 1412636 - 1413802 | 44544.2 |
| susd family protein | BSEG_03572 | Not Available | Negative | 1413821 - 1415311 | 55710.6 |
| tonb-linked outer membrane protein, susc/raga family | BSEG_03571 | Not Available | Negative | 1415332 - 1418649 | 122463.0 |
| sigma factor regulatory protein, fecr/pupr family | BSEG_03570 | Not Available | Negative | 1418705 - 1419865 | 43996.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

