Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | 5_1_36/D4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1590637 bp
Thymine Count
1633510 bp
Guanine Count
1190690 bp
Cytosine Count
1119911 bp
Genome Length
5534748 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| isocitrate dehydrogenase domain protein | BSEG_03591 | Q5HNL1 | Positive | 1395180 - 1396325 | 41679.0 |
| citrate (si)-synthase | BSEG_03590 | Q59939 | Positive | 1396338 - 1397681 | 51060.6 |
| 3-oxo-5-alpha-steroid 4-dehydrogenase | BSEG_03587 | Q2QDF6 | Positive | 1398662 - 1399426 | 29510.6 |
| oxidoreductase, fad/fmn-binding protein | BSEG_03586 | A0A0N9HP11 | Positive | 1399489 - 1400712 | 45490.3 |
| oxidoreductase, short chain dehydrogenase/reductase family protein | BSEG_03585 | Q9QYF1 | Positive | 1400709 - 1401569 | 31866.1 |
| putative membrane protein | BSEG_03584 | Not Available | Negative | 1401678 - 1402604 | 33097.5 |
| hypothetical protein | BSEG_03583 | Not Available | Positive | 1402687 - 1403508 | 31124.6 |
| hypothetical protein | BSEG_03582 | Not Available | Positive | 1403530 - 1404525 | 39135.4 |
| doxx family protein | BSEG_03581 | Not Available | Negative | 1404531 - 1404971 | 16170.6 |
| 6-phosphofructokinase | BSEG_03580 | Q8A8R5 | Positive | 1405231 - 1406211 | 35283.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

