Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | 5_1_36/D4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1590637 bp
Thymine Count
1633510 bp
Guanine Count
1190690 bp
Cytosine Count
1119911 bp
Genome Length
5534748 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BSEG_03672 | Not Available | Positive | 1307261 - 1308820 | 60934.1 |
| hypothetical protein | BSEG_03671 | Not Available | Negative | 1308934 - 1309149 | 8124.18 |
| hydrolase, p-loop family | BSEG_03670 | O05515 | Negative | 1309216 - 1309644 | 16216.2 |
| abc 3 transport family protein | BSEG_03669 | P73087 | Negative | 1309628 - 1310479 | 31359.5 |
| hypothetical protein | BSEG_03668 | Not Available | Negative | 1310540 - 1310959 | 15904.1 |
| putative 3-phosphoshikimate 1-carboxyvinyltransferase | BSEG_03667 | Q64YD8 | Negative | 1310964 - 1312190 | 45934.7 |
| deoxyribose-phosphate aldolase | BSEG_03666 | P0A992 | Negative | 1312351 - 1313403 | 38058.5 |
| 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase | BSEG_03665 | Q5LAT7 | Negative | 1313556 - 1314317 | 29137.8 |
| hypothetical protein | BSEG_03664 | Not Available | Positive | 1314480 - 1315265 | 29779.6 |
| dna polymerase iv | BSEG_03663 | Q64X95 | Negative | 1315249 - 1316310 | 40003.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

