Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | 5_1_36/D4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1590637 bp
Thymine Count
1633510 bp
Guanine Count
1190690 bp
Cytosine Count
1119911 bp
Genome Length
5534748 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5'-nucleotidase, c-terminal domain protein | BSEG_01645 | Not Available | Positive | 136295 - 137074 | 27883.5 |
| ser/thr phosphatase family protein | BSEG_01644 | O34313 | Positive | 137086 - 137928 | 31324.2 |
| beta-lactamase | BSEG_01643 | P40406 | Positive | 137974 - 140952 | 111343.0 |
| ferredoxin | BSEG_01642 | Not Available | Positive | 141070 - 141237 | 5717.65 |
| aspartate transaminase | BSEG_01641 | Q1RGV0 | Negative | 141416 - 142609 | 43151.6 |
| 3,4-dihydroxy-2-butanone-4-phosphate synthase | BSEG_01640 | A6KWQ7 | Negative | 142734 - 143948 | 44989.5 |
| permease, yjgp/yjgq family | BSEG_01639 | Not Available | Negative | 143951 - 145801 | 70642.0 |
| hypothetical protein | BSEG_01638 | Not Available | Negative | 145933 - 146319 | 15243.1 |
| Trna-met | Not Available | Not Available | Positive | 146523 - 146599 | Not Available |
| Trna-met | Not Available | Not Available | Positive | 146658 - 146731 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

