Bacteroides caccae ATCC 43185

Gram-negativeRodAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Bacteroides

Description

Bacteroides caccae ATCC 43185 is a Gram-negative, rod-shaped bacterium classified as an anaerobe, meaning it thrives in environments devoid of oxygen. This species possesses flagella, which are tail-like structures that facilitate movement. Bacteroides caccae has a single replicon, indicating that it has one circular chromosome responsible for its genetic information. The strain is cataloged under the accession number AAVM00000000.2, providing a reference point for genomic studies and further research. Bacteroides species, including B. caccae, are known to play a significant role in the human gut microbiome, contributing to the digestion of complex carbohydrates and the maintenance of gut health. Their anaerobic nature allows them to inhabit the intestinal tract, where they can ferment polysaccharides, producing short-chain fatty acids that are beneficial to human health. The presence of flagella may also aid in motility within the gut environment, allowing B. caccae to navigate and colonize effectively. Overall, Bacteroides caccae ATCC 43185 exemplifies the ecological role of anaerobic bacteria in the human microbiome, highlighting their importance in nutrient metabolism and overall gut health. Understanding the traits and behaviors of this bacterium can inform research on gut microbiota interactions and their implications for human health.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusBacteroides
SpeciesBacteroides caccae
StrainATCC 43185

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Bacteroides caccae ATCC 43185
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bacteroides caccae ATCC 43185 B_caccae-MSIQ_Cont1330, whole genome

Gene Summary

Adenine Count

1292786 bp

Thymine Count

1359421 bp

Guanine Count

998393 bp

Cytosine Count

914214 bp

Genome Length

4564814 bp

Protein-coding Genes

1935 genes

Non-Coding Genes

84 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Hypothetical proteinBACCAC_00734Not AvailablePositive858350 - 85988259837.6
hypothetical proteinBACCAC_00735Not AvailablePositive859884 - 8601209357.93
hypothetical proteinBACCAC_00737Not AvailableNegative859922 - 86053923525.3
hypothetical proteinBACCAC_00736Not AvailablePositive860117 - 86056016847.9
AttlNot AvailableNot AvailablePositive860242 - 860253Not Available
IntegraseBACCAC_00738Not AvailablePositive860550 - 86179447273.8
Structural proteinBACCAC_00739Not AvailablePositive861899 - 86308345043.8
hypothetical proteinBACCAC_00740Not AvailablePositive863184 - 86375622277.8
Hypothetical proteinBACCAC_00741Not AvailablePositive863777 - 86425918594.0
hypothetical proteinBACCAC_00742Not AvailableNegative864256 - 8644899125.31

Displaying genes 1 – 10 of 2019 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

441 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da
BASm0000503L-rhamnoseC6H12O5Chemical structure of L-rhamnose3615-41-6
Average164.1565Da
Monoisotopic164.0684735Da
BASm0000893crotonobetaineC7H13NO2Chemical structure of crotonobetaine927-89-9
Average143.1836Da
Monoisotopic143.0946287Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001035indole-3-pyruvateC11H8NO3Chemical structure of indole-3-pyruvate35656-49-6
Average202.1861Da
Monoisotopic202.0504181Da
BASm0001111keto-D-tagaturonateC6H9O7Chemical structure of keto-D-tagaturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da

Displaying 1–10 of 441 metabolites

Health Effects

No health effects information available for this bacterium.