Phocaeicola salanitronis DSM 18170

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Phocaeicola

Description

Phocaeicola salanitronis DSM 18170 is a Gram-negative bacterium characterized by the presence of flagella, which suggests motility. This species is notable for its genomic features, possessing four distinct replicons. The presence of multiple replicons can indicate a complex genomic architecture, which may contribute to its adaptability and resilience in various environments. The accession numbers for the genomic sequences of Phocaeicola salanitronis include NC_015166.1, NC_015164.1, NC_015165.1, and NC_015168.1, which provide a basis for further genomic analysis and comparative studies with related taxa. These sequences can be crucial for understanding its phylogenetic relationships and potential functional capabilities. The motility conferred by flagella may play a key role in the ecological niche of P. salanitronis. It may allow this bacterium to navigate through its environment effectively, accessing nutrients or evading unfavorable conditions. The genomic complexity suggested by the presence of four replicons may also enhance its survival strategies, potentially allowing it to thrive in fluctuating environments where other microorganisms might struggle. Further studies could elucidate the ecological roles and interactions of Phocaeicola salanitronis within its habitat, contributing to our understanding of microbial diversity and ecosystem dynamics.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusPhocaeicola
SpeciesPhocaeicola salanitronis
StrainDSM 18170

Profile

Physiology
Gram staining properties16865
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Phocaeicola salanitronis DSM 18170 plasmid pBACSA01, complete

Gene Summary

Adenine Count

14704 bp

Thymine Count

12554 bp

Guanine Count

6234 bp

Cytosine Count

6811 bp

Genome Length

40303 bp

Protein-coding Genes

54 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf5712 family proteinBACSA_RS18775Not AvailableNegative108 - 100734977.9
bfma/btga family mobilization proteinBACSA_RS18780Not AvailableNegative1004 - 160622668.3
txe/yoeb family addiction module toxinBACSA_RS18785Not AvailableNegative2097 - 236610738.0
prevent-host-death proteinBACSA_RS20910Not AvailableNegative2359 - 278716487.6
replication initiation proteinBACSA_RS18795Not AvailablePositive3078 - 405838386.5
hypothetical proteinBACSA_RS18800Not AvailablePositive4088 - 42887034.55
bfma/btga family mobilization proteinBACSA_RS18805Not AvailablePositive4402 - 494420511.5
hypothetical proteinBACSA_RS18810Not AvailableNegative5220 - 620637402.3
chromosomal replication initiator protein dnaaBACSA_RS00005Not AvailablePositive92 - 150153645.7
Trna-argNot AvailableNot AvailablePositive1583 - 1656Not Available

Displaying genes 1 – 10 of 3775 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.