Citrobacter sp. wls613

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Citrobacter

Description

Citrobacter sp. WLS613 is a Gram-negative, rod-shaped bacterium distinguished by the presence of flagella, which suggests it is motile. The organism has a single replicon, indicating a streamlined genome organization that is characteristic of some bacterial species. The accession number for this strain is SZXN00000000.1, which provides a reference for further genetic or genomic studies. The traits of Citrobacter sp. WLS613 suggest its potential adaptability in various environments. Gram-negative bacteria are often associated with diverse ecological niches, including soil, water, and the gastrointestinal tracts of animals. The presence of flagella may enhance its ability to navigate through different environments, allowing it to colonize specific habitats effectively. Understanding the characteristics of Citrobacter sp. WLS613 can be significant for ecological studies, particularly in examining its role in nutrient cycling or its interactions with other microorganisms in its habitat. The ability to move and potentially colonize different substrates may allow this bacterium to contribute to the microbial diversity and functionality within its ecosystem. Additionally, the study of such strains can reveal insights into microbial behaviors and adaptations that are crucial for survival in varied ecological contexts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusCitrobacter
SpeciesCitrobacter sp. wls613
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Citrobacter sp. wls613
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Citrobacter sp. wls613 contig22, whole genome shotgun sequence.

Gene Summary

Adenine Count

1124205 bp

Thymine Count

1116261 bp

Guanine Count

1243544 bp

Cytosine Count

1243898 bp

Genome Length

4740309 bp

Protein-coding Genes

4149 genes

Non-Coding Genes

248 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinFDX01_15970Not AvailableNegative3326806 - 332744424052.1
duf3302 domain-containing proteinFDX01_15975Not AvailablePositive3327643 - 332798112905.8
hlyd family secretion proteinFDX01_15980Not AvailablePositive3327984 - 332912342176.9
hamp domain-containing proteinFDX01_15985Not AvailableNegative3329172 - 333111569822.9
acid-activated periplasmic chaperone hdebFDX01_15990Not AvailableNegative3331272 - 333160111950.3
murr/rpir family transcriptional regulatorFDX01_15995Not AvailablePositive3332002 - 333286832494.7
d-alanyl-d-alanine dipeptidaseFDX01_16000Not AvailablePositive3332883 - 333347021422.6
abc transporter substrate-binding proteinFDX01_16005Not AvailablePositive3333487 - 333504957422.2
abc transporter permeaseFDX01_16010Not AvailablePositive3335098 - 333612037474.5
d,d-dipeptide abc transporter permeaseFDX01_16015Not AvailablePositive3336117 - 333701332021.9

Displaying genes 3071 – 3080 of 4397 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.