Citrobacter sp. wls617

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Citrobacter

Description

Citrobacter sp. wls617 is a Gram-negative, rod-shaped bacterium characterized by the presence of flagella, which typically suggests a motile organism. The species is notable for having a single replicon, indicating a streamlined genomic structure that may influence its replication and overall cellular function. The accession number for Citrobacter sp. wls617 is SZXL00000000.1, which provides a reference for genomic information and further research on this organism. Citrobacter species are often associated with diverse environments, including soil and water, and can also be found in the gastrointestinal tracts of animals and humans. Their ecological roles may vary, but they are generally recognized for their contributions to nutrient cycling and potential interactions within microbial communities. The motility provided by flagella can enhance the bacterium's ability to navigate its environment, possibly allowing it to exploit a variety of ecological niches or respond to environmental changes. Understanding the traits of Citrobacter sp. wls617, particularly its motility and genomic structure, could provide insights into its ecological roles and potential applications in microbiology, such as bioremediation or as a model organism for studying bacterial behavior. Further research is warranted to elucidate its specific ecological functions and interactions within microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusCitrobacter
SpeciesCitrobacter sp. wls617
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Citrobacter sp. wls617
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Citrobacter sp. wls617 contig22, whole genome shotgun sequence.

Gene Summary

Adenine Count

1136489 bp

Thymine Count

1129462 bp

Guanine Count

1214674 bp

Cytosine Count

1229405 bp

Genome Length

4715026 bp

Protein-coding Genes

4285 genes

Non-Coding Genes

241 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
outer membrane protein assembly factor bameFDX00_11510Not AvailablePositive2383569 - 238391312506.0
rnfh family proteinFDX00_11515Not AvailableNegative2383964 - 238426011017.4
type ii toxin-antitoxin system rata family toxinFDX00_11520Not AvailableNegative2384244 - 238472617914.0
ssra-binding protein smpbFDX00_11525Not AvailablePositive2384842 - 238532418184.0
tolc family outer membrane proteinFDX00_11535Not AvailablePositive2396942 - 239835151518.8
type i secretion system permease/atpaseFDX00_11540Not AvailablePositive2398348 - 240053480651.6
hlyd family efflux transporter periplasmic adaptor subunitFDX00_11545Not AvailablePositive2400542 - 240170543049.9
Tmrna,resume consensus sequence (at 84): aatagtcgcaaacgacgaNot AvailableNot AvailablePositive2401778 - 2402141Not Available
duf4102 domain-containing proteinFDX00_11555Not AvailablePositive2402265 - 240353647895.2
hypothetical proteinFDX00_11560Not AvailableNegative2403890 - 240469930571.1

Displaying genes 2401 – 2410 of 4526 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.