Rhodococcus oryzae

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Nocardiaceae

Genus

Rhodococcus

Description

Rhodococcus oryzae is a noteworthy bacterium characterized by the presence of flagella, which facilitates its motility. This trait contributes to its ability to adapt to various environments, allowing it to thrive in diverse ecological niches. The organism has a single replicon, indicative of its genomic structure, which can have implications for its replication and genetic stability. The accessions associated with Rhodococcus oryzae include SUMD00000000.1, which may provide essential genomic data for researchers studying its characteristics and behaviors. Such genomic insights can help elucidate the metabolic pathways and ecological roles of this bacterium. In ecological contexts, the motility conferred by flagella may enhance Rhodococcus oryzae's ability to colonize different substrates and interact with other microorganisms. This adaptability could be significant in various environments, particularly in soil and aquatic ecosystems, where it may play a role in biogeochemical cycles. Understanding the traits of Rhodococcus oryzae can contribute to broader knowledge of microbial ecology and the functional roles of bacteria within their habitats.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyNocardiaceae
GenusRhodococcus
SpeciesRhodococcus oryzae
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodococcus oryzae strain NEAU-CX67 Scaffold31, whole genome

Gene Summary

Adenine Count

831339 bp

Thymine Count

822922 bp

Guanine Count

1847503 bp

Cytosine Count

1864077 bp

Genome Length

5365841 bp

Protein-coding Genes

4823 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
30s ribosomal protein s18FCG67_04600Not AvailablePositive1022061 - 10223039230.48
50s ribosomal protein l9FCG67_04605Not AvailablePositive1022316 - 102277115645.0
replicative dna helicaseFCG67_04610Not AvailablePositive1023311 - 102469951061.2
hypothetical proteinFCG67_04615Not AvailableNegative1025356 - 102601224427.8
tetr/acrr family transcriptional regulatorFCG67_04625Not AvailableNegative1027611 - 102820421752.9
nad-dependent epimerase/dehydratase family proteinFCG67_04630Not AvailablePositive1028135 - 102923540254.1
vano-type vancomycin resistance dna-binding response regulator vanrFCG67_04635Not AvailablePositive1030029 - 103072125054.9
vano-type vancomycin resistance histidine kinase vansFCG67_04640Not AvailablePositive1030714 - 103181439277.3
udp-n-acetylglucosamine--n-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol n-acetylglucosamine transferaseFCG67_04645Not AvailableNegative1031747 - 103289840014.7
hypothetical proteinFCG67_04650Not AvailableNegative1032898 - 103350622664.9

Displaying genes 911 – 920 of 4881 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.