Rhodococcus oryzae

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Nocardiaceae

Genus

Rhodococcus

Description

Rhodococcus oryzae is a noteworthy bacterium characterized by the presence of flagella, which facilitates its motility. This trait contributes to its ability to adapt to various environments, allowing it to thrive in diverse ecological niches. The organism has a single replicon, indicative of its genomic structure, which can have implications for its replication and genetic stability. The accessions associated with Rhodococcus oryzae include SUMD00000000.1, which may provide essential genomic data for researchers studying its characteristics and behaviors. Such genomic insights can help elucidate the metabolic pathways and ecological roles of this bacterium. In ecological contexts, the motility conferred by flagella may enhance Rhodococcus oryzae's ability to colonize different substrates and interact with other microorganisms. This adaptability could be significant in various environments, particularly in soil and aquatic ecosystems, where it may play a role in biogeochemical cycles. Understanding the traits of Rhodococcus oryzae can contribute to broader knowledge of microbial ecology and the functional roles of bacteria within their habitats.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyNocardiaceae
GenusRhodococcus
SpeciesRhodococcus oryzae
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodococcus oryzae strain NEAU-CX67 Scaffold31, whole genome

Gene Summary

Adenine Count

831339 bp

Thymine Count

822922 bp

Guanine Count

1847503 bp

Cytosine Count

1864077 bp

Genome Length

5365841 bp

Protein-coding Genes

4823 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
allophanate hydrolase subunit 1FCG67_16680Not AvailablePositive3623932 - 362454321612.5
mfs transporterFCG67_16685Not AvailableNegative3624615 - 362601246969.8
zip family metal transporterFCG67_16690Not AvailableNegative3626154 - 362684323131.7
biotin-dependent carboxyltransferase family proteinFCG67_16695Not AvailablePositive3626872 - 362777130888.4
amidaseFCG67_16700Not AvailableNegative3627759 - 362887438678.9
23s rrna (guanosine(2251)-2'-o)-methyltransferase rlmbFCG67_16705Not AvailableNegative3629027 - 363001333762.2
cysteine--trna ligaseFCG67_16710Not AvailableNegative3630013 - 363142251399.3
2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthaseFCG67_16715Not AvailableNegative3631434 - 363191015862.9
2-c-methyl-d-erythritol 4-phosphate cytidylyltransferaseFCG67_16720Not AvailableNegative3631925 - 363263524438.4
card family transcriptional regulatorFCG67_16725Not AvailableNegative3632639 - 363312717890.4

Displaying genes 3281 – 3290 of 4881 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.