Rhodococcus oryzae

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Nocardiaceae

Genus

Rhodococcus

Description

Rhodococcus oryzae is a noteworthy bacterium characterized by the presence of flagella, which facilitates its motility. This trait contributes to its ability to adapt to various environments, allowing it to thrive in diverse ecological niches. The organism has a single replicon, indicative of its genomic structure, which can have implications for its replication and genetic stability. The accessions associated with Rhodococcus oryzae include SUMD00000000.1, which may provide essential genomic data for researchers studying its characteristics and behaviors. Such genomic insights can help elucidate the metabolic pathways and ecological roles of this bacterium. In ecological contexts, the motility conferred by flagella may enhance Rhodococcus oryzae's ability to colonize different substrates and interact with other microorganisms. This adaptability could be significant in various environments, particularly in soil and aquatic ecosystems, where it may play a role in biogeochemical cycles. Understanding the traits of Rhodococcus oryzae can contribute to broader knowledge of microbial ecology and the functional roles of bacteria within their habitats.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyNocardiaceae
GenusRhodococcus
SpeciesRhodococcus oryzae
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodococcus oryzae strain NEAU-CX67 Scaffold31, whole genome

Gene Summary

Adenine Count

831339 bp

Thymine Count

822922 bp

Guanine Count

1847503 bp

Cytosine Count

1864077 bp

Genome Length

5365841 bp

Protein-coding Genes

4823 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf3153 domain-containing proteinFCG67_11730Not AvailablePositive2551808 - 255250624791.4
methylenetetrahydrofolate reductaseFCG67_11735Not AvailableNegative2552567 - 255353235422.1
polyprenyl synthetase family proteinFCG67_11740Not AvailablePositive2553612 - 255473939799.9
phytoene desaturaseFCG67_11745Not AvailablePositive2554739 - 255635557048.1
alpha-(1->6)-mannopyranosyltransferase aFCG67_11750Not AvailablePositive2556437 - 255804756367.1
phytoene/squalene synthase family proteinFCG67_11755Not AvailablePositive2558049 - 255899634096.9
sdr family oxidoreductaseFCG67_11760Not AvailableNegative2559001 - 255988230781.4
dna-binding proteinFCG67_11765Not AvailableNegative2559937 - 256030513445.3
stk1 family pasta domain-containing ser/thr kinaseFCG67_11770Not AvailablePositive2560474 - 256251370988.5
lipaseFCG67_11775Not AvailablePositive2562666 - 256358031716.8

Displaying genes 2311 – 2320 of 4881 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.