Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4983 domain-containing protein | FBD94_04760 | Not Available | Positive | 1252677 - 1254440 | 64267.9 |
| duf5013 domain-containing protein | FBD94_04765 | Not Available | Positive | 1254464 - 1255933 | 53398.0 |
| glycoside hydrolase family 2 | FBD94_04770 | Not Available | Positive | 1255970 - 1258669 | 101982.0 |
| arac family transcriptional regulator | FBD94_04775 | Not Available | Negative | 1258647 - 1259489 | 32447.4 |
| mfs transporter | FBD94_04780 | Not Available | Positive | 1259583 - 1261103 | 54368.2 |
| fecr family protein | FBD94_04785 | Not Available | Positive | 1261304 - 1262404 | 41276.1 |
| helix-turn-helix transcriptional regulator | FBD94_04790 | Not Available | Negative | 1262392 - 1263345 | 36679.8 |
| nuclear transport factor 2 family protein | FBD94_04795 | Not Available | Positive | 1263545 - 1263919 | 14051.8 |
| gnat family n-acetyltransferase | FBD94_04800 | Not Available | Positive | 1263946 - 1264470 | 20022.9 |
| pas domain-containing sensor histidine kinase | FBD94_04805 | Not Available | Negative | 1264451 - 1266412 | 74728.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

