Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-glucuronidase | FBD94_04710 | Not Available | Positive | 1233223 - 1235421 | 82935.7 |
| duf4981 domain-containing protein | FBD94_04715 | Not Available | Positive | 1235470 - 1238643 | 119450.0 |
| susc/raga family tonb-linked outer membrane protein | FBD94_04720 | Not Available | Positive | 1238693 - 1241629 | 110316.0 |
| ragb/susd family nutrient uptake outer membrane protein | FBD94_04725 | Not Available | Positive | 1241748 - 1243181 | 54863.3 |
| hypothetical protein | FBD94_04730 | Not Available | Positive | 1243187 - 1244374 | 44449.9 |
| duf5007 domain-containing protein | FBD94_04735 | Not Available | Positive | 1244380 - 1245498 | 41939.0 |
| susc/raga family tonb-linked outer membrane protein | FBD94_04740 | Not Available | Positive | 1245470 - 1248661 | 116395.0 |
| ragb/susd family nutrient uptake outer membrane protein | FBD94_04745 | Not Available | Positive | 1248684 - 1250192 | 56406.6 |
| hypothetical protein | FBD94_04750 | Not Available | Positive | 1250212 - 1250952 | 27369.5 |
| duf5008 domain-containing protein | FBD94_04755 | Not Available | Positive | 1251001 - 1252647 | 59329.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

