Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1565 domain-containing protein | FBD94_04660 | Not Available | Positive | 1202714 - 1226284 | 823088.0 |
| hypothetical protein | FBD94_04665 | Not Available | Positive | 1226290 - 1227393 | 38384.8 |
| tail fiber domain-containing protein | FBD94_04670 | Not Available | Positive | 1227396 - 1228316 | 33019.9 |
| hypothetical protein | FBD94_04675 | Not Available | Positive | 1228442 - 1229221 | 30480.8 |
| ketoacyl-acp synthase iii | FBD94_04680 | Not Available | Negative | 1229238 - 1230245 | 37087.3 |
| acyl carrier protein | FBD94_04685 | Not Available | Negative | 1230261 - 1230491 | 8705.29 |
| acetyltransferase | FBD94_04690 | Not Available | Negative | 1230527 - 1231171 | 22855.2 |
| Trna-cys | Not Available | Not Available | Positive | 1231229 - 1231301 | Not Available |
| exonuclease | FBD94_04700 | Not Available | Positive | 1231555 - 1232028 | 18312.7 |
| hypothetical protein | FBD94_04705 | Not Available | Negative | 1232034 - 1232825 | 28826.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

