Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FBD94_04610 | Not Available | Positive | 1183749 - 1185350 | 60848.2 |
| glycoside hydrolase family 97 protein | FBD94_04615 | Not Available | Positive | 1185362 - 1187473 | 79518.5 |
| ycei family protein | FBD94_04620 | Not Available | Positive | 1187568 - 1188155 | 20436.6 |
| hypothetical protein | FBD94_04625 | Not Available | Negative | 1188218 - 1189474 | 47773.4 |
| glycoside hydrolase family 92 protein | FBD94_04630 | Not Available | Positive | 1189659 - 1191926 | 85346.1 |
| glycoside hydrolase family 92 protein | FBD94_04635 | Not Available | Positive | 1191926 - 1194232 | 85968.1 |
| glycoside hydrolase family 28 protein | FBD94_04640 | Not Available | Positive | 1194242 - 1195813 | 57141.3 |
| tonb-dependent receptor | FBD94_04645 | Not Available | Positive | 1195952 - 1198993 | 110712.0 |
| ragb/susd family nutrient uptake outer membrane protein | FBD94_04650 | Not Available | Positive | 1199004 - 1200425 | 53115.6 |
| hypothetical protein | FBD94_04655 | Not Available | Positive | 1200462 - 1202465 | 72368.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

