Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | FBD94_00370 | Not Available | Negative | 88946 - 90577 | 62339.9 |
| hypothetical protein | FBD94_00375 | Not Available | Positive | 90623 - 91081 | 17335.0 |
| nad(p)h-dependent oxidoreductase | FBD94_00380 | Not Available | Negative | 91068 - 91589 | 19376.4 |
| para family protein | FBD94_00385 | Not Available | Positive | 91772 - 92575 | 29619.0 |
| parb/repb/spo0j family partition protein | FBD94_00390 | Not Available | Positive | 92586 - 93509 | 34775.9 |
| hypothetical protein | FBD94_00395 | Not Available | Positive | 93509 - 94129 | 22921.8 |
| 4-hydroxy-tetrahydrodipicolinate reductase | FBD94_00400 | Not Available | Positive | 94157 - 94897 | 27432.6 |
| signal peptidase i | FBD94_00405 | Not Available | Positive | 94904 - 96103 | 45908.9 |
| ldh family oxidoreductase | FBD94_00410 | Not Available | Negative | 96100 - 97185 | 38955.8 |
| bacillithiol biosynthesis cysteine-adding enzyme bshc | FBD94_00415 | Not Available | Negative | 97191 - 98777 | 60921.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

